kemal
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End-to-end variant interpretation platform for rare genetic disease research: SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline, LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure. Public test data only; no clinical claims.
9 lines
284 B
TOML
9 lines
284 B
TOML
[project]
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name = "rarelens-ml"
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version = "0.1.0"
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requires-python = ">=3.12"
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dependencies = ["lightgbm>=4.5", "mlflow>=2.16", "pandas", "scikit-learn", "sqlalchemy", "psycopg[binary]"]
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[project.optional-dependencies]
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gpu = ["torch"] # for the optional deep-learning baseline on GPU
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