kemal
631c1d030d
Phase 0 deliverables: full technical specification and roadmap (SIMURGARRAY_MASTER_PLAN.md), CLAUDE.md, bootstrap script for reference open-source repos and tiered dataset fetch script with checksums.
12 lines
454 B
Markdown
12 lines
454 B
Markdown
# SimurgArray
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Personal research toolkit for Illumina Infinium genotyping BeadChip data
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(IDAT → normalization → genotype calling → BAF/LRR → QC → VCF/PLINK; later CN/LOH, PGx, cluster training).
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Start with **SIMURGARRAY_MASTER_PLAN.md** (full specification and roadmap).
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```bash
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bash scripts/bootstrap_refs.sh # clone reference open-source repos into refs/
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bash scripts/fetch_data.sh p0 # download small test datasets into data/
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```
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