kemal
457eaf65e7
216 implanted events in 22 synthetic GSA samples (4 replicates per kind x fraction x size; reference model from 30 other samples): constitutional DEL/DUP 16/16 at 5-20 Mb, mosaic loss/gain/CN-LOH at 15 % / 5 Mb 12/12.
97 lines
1.4 KiB
JSON
97 lines
1.4 KiB
JSON
{
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"events": 216,
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"detected": 126,
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"table": {
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"MDEL f=0.10": {
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"5 Mb": "1/4",
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"20 Mb": "3/4",
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"1 Mb": "1/4"
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},
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"MLOH f=0.10": {
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"5 Mb": "0/4",
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"20 Mb": "0/4",
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"1 Mb": "0/4"
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},
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"MDUP f=0.20": {
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"1 Mb": "4/4",
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"20 Mb": "4/4",
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"5 Mb": "3/4"
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},
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"MLOH f=0.15": {
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"1 Mb": "0/4",
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"5 Mb": "4/4",
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"20 Mb": "4/4"
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},
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"MLOH f=0.30": {
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"1 Mb": "0/4",
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"20 Mb": "4/4",
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"5 Mb": "2/4"
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},
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"DEL": {
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"1 Mb": "4/4",
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"5 Mb": "4/4",
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"20 Mb": "4/4"
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},
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"MLOH f=0.20": {
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"1 Mb": "0/4",
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"5 Mb": "4/4",
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"20 Mb": "4/4"
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},
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"MLOH f=0.05": {
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"1 Mb": "0/4",
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"5 Mb": "0/4",
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"20 Mb": "0/4"
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},
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"MDEL f=0.20": {
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"1 Mb": "4/4",
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"20 Mb": "4/4",
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"5 Mb": "3/4"
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},
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"MDEL f=0.30": {
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"20 Mb": "4/4",
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"5 Mb": "4/4",
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"1 Mb": "4/4"
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},
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"MDUP f=0.10": {
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"20 Mb": "2/4",
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"1 Mb": "0/4",
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"5 Mb": "2/4"
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},
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"MDUP f=0.30": {
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"5 Mb": "4/4",
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"20 Mb": "4/4",
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"1 Mb": "4/4"
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},
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"DUP": {
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"1 Mb": "2/4",
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"20 Mb": "4/4",
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"5 Mb": "4/4"
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},
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"MDEL f=0.05": {
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"5 Mb": "0/4",
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"20 Mb": "0/4",
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"1 Mb": "0/4"
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},
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"LOH": {
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"5 Mb": "3/4",
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"20 Mb": "4/4",
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"1 Mb": "0/4"
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},
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"MDUP f=0.15": {
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"1 Mb": "1/4",
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"5 Mb": "4/4",
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"20 Mb": "4/4"
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},
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"MDEL f=0.15": {
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"20 Mb": "4/4",
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"5 Mb": "4/4",
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"1 Mb": "3/4"
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},
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"MDUP f=0.05": {
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"5 Mb": "0/4",
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"1 Mb": "0/4",
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"20 Mb": "0/4"
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}
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},
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"calls_total": 564
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} |