SimurgArray

3 Commits 1 Branch 3 Tags

3 Commits

Author	SHA1	Message	Date
kemal	854cf95029	Add sanitized Phase-0 research archive under docs/research Research notes R1-R4, documentation-study files A-E (source of the functional spec's `src:` tags) and PGx coverage CSVs, rewritten to use neutral naming and current project decisions (plan §2).	2026-09-27 16:27:34 +01:00
kemal	336a6b8226	Add functional specification (416 items) and link it from plan/docs SIMURGARRAY_FUNCTIONAL_SPEC.md defines externally visible behaviour: CLI, inputs, genotyping outputs, QC and report, cytogenetics CNV/LOH, targeted PGx copy number, star alleles, methylation control QC, edge-case catalogue, performance targets, open questions and a traceability table.	2026-09-27 16:13:40 +01:00
kemal	631c1d030d	SimurgArray: master plan, repo scaffolding and data/ref fetch scripts Phase 0 deliverables: full technical specification and roadmap (SIMURGARRAY_MASTER_PLAN.md), CLAUDE.md, bootstrap script for reference open-source repos and tiered dataset fetch script with checksums.	2026-09-27 15:20:06 +01:00

Author

SHA1

Message

Date

kemal

854cf95029

Add sanitized Phase-0 research archive under docs/research

Research notes R1-R4, documentation-study files A-E (source of the
functional spec's `src:` tags) and PGx coverage CSVs, rewritten to use
neutral naming and current project decisions (plan §2).

2026-09-27 16:27:34 +01:00

kemal

336a6b8226

Add functional specification (416 items) and link it from plan/docs

SIMURGARRAY_FUNCTIONAL_SPEC.md defines externally visible behaviour:
CLI, inputs, genotyping outputs, QC and report, cytogenetics CNV/LOH,
targeted PGx copy number, star alleles, methylation control QC, edge-case
catalogue, performance targets, open questions and a traceability table.

2026-09-27 16:13:40 +01:00

kemal

631c1d030d

SimurgArray: master plan, repo scaffolding and data/ref fetch scripts

Phase 0 deliverables: full technical specification and roadmap
(SIMURGARRAY_MASTER_PLAN.md), CLAUDE.md, bootstrap script for reference
open-source repos and tiered dataset fetch script with checksums.

2026-09-27 15:20:06 +01:00