kemal/SimurgArray
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v1.0.0: user guide, examples, changelog
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Browse Source 
docs/user_guide.md (install, inputs, complete run, commands, presets, QC, outputs,
accuracy, limitations, troubleshooting), examples/gsa_demo.sh (end-to-end run on the
public GSA demo, verified on the Pi), examples/sample_sheet.csv, CHANGELOG.md; version 1.0.0.
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kemal committed 2026-09-28 20:38:24 +01:00
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examples/sample_sheet.csv
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[Header]
Investigator Name,Example
Project Name,SimurgArray demo
[Data]
Sample_ID,SentrixBarcode_A,SentrixPosition_A,Sample_Plate,Sample_Well,Sex,Parent1,Parent2,Replicate,Batch
child1,207895980019,R03C01,Plate1,A01,F,father1,mother1,,B1
father1,207895980019,R03C02,Plate1,B01,M,,,,B1
mother1,207895980019,R04C01,Plate1,C01,F,,,,B1
child1_rep,207895980019,R05C01,Plate1,D01,F,,,child1,B2
1 [Header]
2 Investigator Name,Example
3 Project Name,SimurgArray demo
4 [Data]
5 Sample_ID,SentrixBarcode_A,SentrixPosition_A,Sample_Plate,Sample_Well,Sex,Parent1,Parent2,Replicate,Batch
6 child1,207895980019,R03C01,Plate1,A01,F,father1,mother1,,B1
7 father1,207895980019,R03C02,Plate1,B01,M,,,,B1
8 mother1,207895980019,R04C01,Plate1,C01,F,,,,B1
9 child1_rep,207895980019,R05C01,Plate1,D01,F,,,child1,B2