Prepare for public release on Gitea: simurgarray package names, community files, Gitea templates, pseudonymised P6 probe names

.gitea/ISSUE_TEMPLATE/bug_report.yaml

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+name: Bug report
+about: A crash, an error message, or a result that looks wrong
+title: "[bug] "
+labels: []
+body:
+  - type: markdown
+    attributes:
+      value: |
+        Thank you for reporting. Please do **not** attach vendor files (IDAT, BPM, CSV, EGT, GTC) or any genetic data of real people.
+  - type: input
+    id: version
+    attributes:
+      label: SimurgArray version
+      description: Output of `simurg --version`
+    validations:
+      required: true
+  - type: dropdown
+    id: platform
+    attributes:
+      label: Platform
+      options:
+        - Linux x86_64
+        - Linux aarch64 (for example Raspberry Pi)
+        - Docker
+        - conda
+        - other
+    validations:
+      required: true
+  - type: input
+    id: backend
+    attributes:
+      label: Backend
+      description: Output of `python -c "from simurg._core import backend; print(backend())"`
+  - type: textarea
+    id: command
+    attributes:
+      label: Command
+      description: The exact command you ran
+      render: shell
+    validations:
+      required: true
+  - type: textarea
+    id: what
+    attributes:
+      label: What happened, and what you expected
+    validations:
+      required: true
+  - type: textarea
+    id: log
+    attributes:
+      label: Error message or log
+      description: Add `--debug` for a traceback. Error codes look like `E_...` or `W_...`.
+      render: text
+  - type: textarea
+    id: manifest
+    attributes:
+      label: run_manifest.json
+      description: Paste or attach the run manifest of the run; it lists versions, options and input checksums.
+      render: json
+  - type: checkboxes
+    id: privacy
+    attributes:
+      label: Privacy
+      options:
+        - label: I did not attach vendor files or genetic data of real people.
+          required: true

.gitea/ISSUE_TEMPLATE/config.yaml

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+blank_issues_enabled: false

.gitea/ISSUE_TEMPLATE/feature_request.yaml

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+name: Feature request
+about: Suggest a new capability or a change in behaviour
+title: "[feature] "
+labels: []
+body:
+  - type: textarea
+    id: problem
+    attributes:
+      label: What are you trying to do?
+      description: The research task or workflow, and where SimurgArray gets in the way.
+    validations:
+      required: true
+  - type: textarea
+    id: proposal
+    attributes:
+      label: What would help?
+      description: Describe the behaviour you would like. Mention spec items (for example CLI-021) if you know them.
+    validations:
+      required: true
+  - type: textarea
+    id: validation
+    attributes:
+      label: How could it be validated?
+      description: A public dataset, a reference tool or a paper the result could be checked against.

.gitea/pull_request_template.md

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+## What changes
+
+## Spec items touched
+
+<!-- for example CLI-021, OUT-031; update the spec in the same pull request if behaviour changes -->
+
+## How it was validated
+
+<!-- unit tests, oracle tests you ran, datasets, numbers -->
+
+## Checklist
+
+* [ ] `ruff`, `mypy` and `pytest tests/unit` pass
+* [ ] `CHANGELOG.md` updated (Unreleased) if users would notice
+* [ ] differences from reference tools recorded in `docs/known_unknowns.md`
+* [ ] no vendor data, no genetic data of real people, no credentials

.gitea/workflows/ci.yml

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+# Gitea Actions workflow: lint, types, secret scan and unit tests with and without the compiled kernels.
+name: ci
+on:
+  push:
+  pull_request:
+
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python: ["3.12", "3.13"]
+    steps:
+      - uses: actions/checkout@v4
+      - uses: astral-sh/setup-uv@v5
+        with:
+          python-version: ${{ matrix.python }}
+      - name: Secret scan (no cloud keys or private keys in the repository)
+        run: |
+          if git grep -nIE '(AKIA|ASIA)[A-Z0-9]{16}|aws_secret_access_key *=|BEGIN [A-Z ]*PRIVATE KEY'; then
+            echo "::error::credential-like content found"; exit 1
+          fi
+      - name: Install
+        # setup-uv >= 5.x already creates and activates .venv when python-version is set; --clear works either way
+        run: uv venv --clear && uv pip install -e ".[dev]"
+      - name: Lint
+        run: uv run ruff check src tests && uv run ruff format --check src tests
+      - name: Type check
+        run: uv run mypy
+      - name: Unit tests (no downloaded data needed)
+        run: uv run pytest tests/unit -q
+      - name: Build the compiled kernels (rust/simurg-core)
+        run: |
+          command -v cc >/dev/null || { apt-get update -qq && apt-get install -y -qq gcc >/dev/null; }  # Rust needs a C linker
+          curl --proto '=https' --tlsv1.2 -sSf https://sh.rustup.rs | sh -s -- -y --profile minimal
+          PATH="$HOME/.cargo/bin:$PATH" uv pip install ./rust/simurg-core
+      - name: Unit tests with the compiled kernels (must equal the pure-Python results)
+        run: uv run pytest tests/unit -q