Prepare for public release on Gitea: simurgarray package names, community files, Gitea templates, pseudonymised P6 probe names
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# Security policy
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## Supported versions
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Security fixes go into the latest release. Older releases are not patched; upgrade to the newest version.
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## Reporting a vulnerability
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Please do not open a public issue for a security problem. Contact the maintainer privately through the contact
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details on the maintainer's profile page, https://gitea.yaylali.uk/kemal, and include:
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* the SimurgArray version (`simurg --version`),
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* what an attacker could do and under which conditions,
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* the smallest input or command that shows the problem, without real genetic data.
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You will get an answer within a week. Once a fix is released, the report is credited in `CHANGELOG.md` unless you
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prefer otherwise.
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## What counts
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SimurgArray reads files that users download from third parties. Problems worth reporting include:
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* crafted IDAT, BPM, CSV, EGT, GTC, VCF or sample sheet files that crash the reader in an unsafe way, write outside
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the output folder, or execute code;
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* HTML reports that run script from their input data (reports are meant to be safe to open and share);
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* anything that could leak sample sheet metadata or genetic data beyond what the user chose to include.
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## Handling genetic data
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Genotype data are personal data. SimurgArray never sends data anywhere: it has no network access at run time and
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its reports embed everything they need. Users are responsible for storing and sharing outputs according to their
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consent and data protection rules. The QC report offers `--no-metadata`, `--drop-metadata` and `--keep-metadata` to
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control what it contains.
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