Lint fixes in validate_p1_large.py

This commit is contained in:
kemal committed 2026-09-27 19:30:37 +01:00
1 parent 46e46037cd
commit d957a70165
1 file changed
+3 -3
+3 -3
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@@ -78,7 +78,7 @@ def check_gtc(path: str) -> dict[str, Any]:
if [tuple(float(v) for v in t) for t in xf_b] != xf_g:
res["diffs"].append("normalization_transforms")
res["ok"] = not res["diffs"]
except Exception as e: # noqa: BLE001 - report everything
except Exception as e:
res.update(ok=False, error=f"{type(e).__name__}: {e}", trace=traceback.format_exc(limit=3))
return res
@@ -98,7 +98,7 @@ def check_idat_pair(args: tuple[str, str]) -> dict[str, Any]:
scan=g.scan_time_iso,
name_ok=(g.barcode in Path(grn).name),
)
except Exception as e: # noqa: BLE001
except Exception as e:
res.update(ok=False, error=f"{type(e).__name__}: {e}")
return res
@@ -162,7 +162,7 @@ def main() -> int:
"address_a": m.address_a.tolist() == b.addresses,
"assay_types": m.assay_types.tolist() == b.assay_types,
"normalization_lookups": m.normalization_lookups().tolist() == b.normalization_lookups,
"n_bins": int(len(np.unique(m.norm_bin_ids()))),
"n_bins": len(np.unique(m.norm_bin_ids())),
}
e = read_egt(a.egt)
with open(a.egt, "rb") as fh: