sesame oracle: compare without bead-count masking on both sides

Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv

scripts/v2/methyl_oracle_compare.py

@@ -36,7 +36,8 @@ def main() -> int:
     pos = {p: i for i, p in enumerate(man.probe_ids)}
     res = {}
     for prefix in a.prefixes:
-        s = sig.assemble(read_idat(prefix + "_Grn.idat"), read_idat(prefix + "_Red.idat"), man)
+        # min_beads=0: the oracle runs without bead-count masking (see sesame_oracle.R)
+        s = sig.assemble(read_idat(prefix + "_Grn.idat"), read_idat(prefix + "_Red.idat"), man, min_beads=0)
         p = sig.detection_p(s)
         n, fg, fr = sig.noob(s)
         b = sig.beta_values(n)