Apply the brand across the repo: reports, README, guide
* simurg/core/brand.py: single source of the mark geometry, colours, favicon and the report header band (scripts/brand now load it from there). * HTML reports (QC report, compare dashboard, methylation QC): offline SVG favicon, indigo header band with the mark, version and a sha256 of the data shown; Noto Sans font stack; methylation plots in Okabe-Ito colours. * README banner, guide logo, brand/blog links; branding brief updated to the final identity; Noto (OFL) and Okabe-Ito entries in THIRD_PARTY_NOTICES; CHANGELOG (Unreleased). Unit tests + P5 QC oracle: 285 passed; ruff and mypy clean.
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@@ -536,9 +536,14 @@ def payload(datasets: Sequence[Dataset], th: Thresholds, generated: str, metadat
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def render_html(data: Mapping[str, Any]) -> str:
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blob = json.dumps(data, sort_keys=True, ensure_ascii=False, separators=(",", ":"), allow_nan=False)
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packed = base64.b64encode(gzip.compress(blob.encode("utf-8"), compresslevel=9, mtime=0)).decode("ascii")
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page = _asset("template.html").replace("__TITLE__", f"{PRODUCT_NAME} QC Report").replace("__DATA__", packed)
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from simurg.core.brand import BAR_CSS, favicon_link, report_bar
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checksum = hashlib.sha256(blob.encode("utf-8")).hexdigest()
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bar = report_bar("QC Report", __version__, "data sha256", checksum)
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page = (_asset("template.html").replace("__TITLE__", f"{PRODUCT_NAME} QC Report").replace("__DATA__", packed)
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.replace("__FAVICON__", favicon_link()).replace("__BRANDBAR__", bar)) # fmt: skip
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for marker, text in (
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("/*__STYLE__*/", _asset("report.css")),
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("/*__STYLE__*/", _asset("report.css") + "\n" + BAR_CSS),
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("/*__APP__*/", _asset("report.js")),
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("/*__PLOTLY__*/", _plotly().replace("</script", "<\\/script")),
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):
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