Initial release: rarelens platform skeleton (AGPL-3.0)
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End-to-end variant interpretation platform for rare genetic disease research: SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline, LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure. Public test data only; no clinical claims.
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resource "google_sql_database_instance" "pg" {
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name = "rarelens-pg"
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database_version = "POSTGRES_16"
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region = var.region
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deletion_protection = false
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settings {
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tier = "db-f1-micro" # lab budget; bump for real use
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availability_type = "ZONAL"
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backup_configuration { enabled = true }
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ip_configuration {
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ipv4_enabled = false
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private_network = google_compute_network.vpc.id
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}
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}
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}
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resource "google_sql_database" "rarelens" {
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name = "rarelens"
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instance = google_sql_database_instance.pg.name
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}
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resource "google_sql_user" "api" {
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name = "rarelens"
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instance = google_sql_database_instance.pg.name
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password = random_password.pg.result
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}
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resource "random_password" "pg" { length = 32 }
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