Initial release: rarelens platform skeleton (AGPL-3.0)
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End-to-end variant interpretation platform for rare genetic disease research:
SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline,
LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure.
Public test data only; no clinical claims.
This commit is contained in:
2026-09-11 16:55:35 +01:00
commit 5463f489a3
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resource "google_sql_database_instance" "pg" {
name = "rarelens-pg"
database_version = "POSTGRES_16"
region = var.region
deletion_protection = false
settings {
tier = "db-f1-micro" # lab budget; bump for real use
availability_type = "ZONAL"
backup_configuration { enabled = true }
ip_configuration {
ipv4_enabled = false
private_network = google_compute_network.vpc.id
}
}
}
resource "google_sql_database" "rarelens" {
name = "rarelens"
instance = google_sql_database_instance.pg.name
}
resource "google_sql_user" "api" {
name = "rarelens"
instance = google_sql_database_instance.pg.name
password = random_password.pg.result
}
resource "random_password" "pg" { length = 32 }