Initial release: rarelens platform skeleton (AGPL-3.0)
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End-to-end variant interpretation platform for rare genetic disease research: SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline, LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure. Public test data only; no clinical claims.
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apiVersion: apps/v1
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kind: Deployment
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metadata: { name: postgres }
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spec:
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selector: { matchLabels: { app: postgres } }
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template:
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metadata: { labels: { app: postgres } }
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spec:
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containers:
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- name: postgres
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image: postgres:16-alpine
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env:
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- { name: POSTGRES_USER, value: rarelens }
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- { name: POSTGRES_PASSWORD, value: rarelens }
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- { name: POSTGRES_DB, value: rarelens }
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---
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apiVersion: v1
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kind: Service
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metadata: { name: postgres }
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spec: { selector: { app: postgres }, ports: [{ port: 5432 }] }
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