Initial release: rarelens platform skeleton (AGPL-3.0)

End-to-end variant interpretation platform for rare genetic disease research:
SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline,
LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure.
Public test data only; no clinical claims.

infra/argocd/app.yaml

@@ -0,0 +1,13 @@
+apiVersion: argoproj.io/v1alpha1
+kind: Application
+metadata: { name: rarelens, namespace: argocd }
+spec:
+  project: default
+  source:
+    repoURL: https://github.com/lynchaos/rarelens
+    targetRevision: main
+    path: infra/k8s/overlays/gcp
+  destination: { server: https://kubernetes.default.svc, namespace: rarelens }
+  syncPolicy:
+    automated: { prune: true, selfHeal: true }
+    syncOptions: [CreateNamespace=true]