Initial release: rarelens platform skeleton (AGPL-3.0)

End-to-end variant interpretation platform for rare genetic disease research:
SvelteKit UI, FastAPI + PostgreSQL API, Nextflow/Ensembl VEP pipeline,
LightGBM pathogenicity scoring with MLflow, K8s/ArgoCD/GCP infrastructure.
Public test data only; no clinical claims.

.gitignore

@@ -0,0 +1,17 @@
+__pycache__/
+*.pyc
+.venv/
+.env
+!web/.env
+node_modules/
+web/.svelte-kit/
+web/build/
+pipeline/work/
+pipeline/.nextflow*
+pipeline/results/
+mlruns/
+*.tfstate
+*.tfstate.backup
+.terraform/
+data/*.vcf*
+!data/README.md