kemalandClaude Opus 5.5
854fe132cc
All 2141 vendor-written GTC v3 files match BeadArrayFiles field by field and re-encode byte-identically; all IDAT pairs parse; the 2.45M-locus BPM, dbv-7 EGT and CSV manifest agree with BeadArrayFiles and each other. Run on a self-destructing AWS spot instance (42 min, ~$0.20). Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
54 lines
953 B
JSON
54 lines
953 B
JSON
{
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"root": "/work/omni/data",
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"started": "2026-09-27T19:00:42Z",
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"n_gtc": 2141,
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"n_idat_pairs": 2141,
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"unpaired_idats": 0,
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"gtc_ok": 2141,
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"gtc_roundtrip_identical": 2141,
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"gtc_versions": [
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3
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],
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"gtc_autocall_versions": [
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"1.6.2.2"
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],
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"gtc_failures": [],
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"gtc_roundtrip_failures": [],
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"idat_ok": 2141,
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"idat_failures": [],
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"idat_midblock_itemsizes": [
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4
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],
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"idat_chip_types": [
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"BeadChip 4x10"
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],
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"bpm": {
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"num_loci": 2450000,
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"names": true,
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"snps": true,
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"chroms": true,
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"map_infos": true,
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"address_a": true,
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"assay_types": true,
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"normalization_lookups": true,
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"n_bins": 51
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},
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"egt": {
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"num_records": 2450000,
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"dbv": 7,
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"extra_floats": 15,
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"record_mismatches": 0
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},
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"bpm_csv_problems": [],
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"gtc_vs_bpm_num_snps": [
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2450000,
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2450000
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],
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"gtc_transforms_vs_bins": [
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51,
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51
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],
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"seconds": 1098.7,
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"passed": true
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}
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