kemal aa063ccfae P8 cloud task: stream NYGC VCFs through bcftools instead of downloading ...

The download-only phase (EBI ~15 MB/s) left the CPU idle long enough for the
idle alarm to terminate the first run. Streams are now cut to the manifest
positions (±100 bp) and the 120 individuals while genotyping runs.

2026-09-28 19:06:36 +01:00

..

tasks

P8 cloud task: stream NYGC VCFs through bcftools instead of downloading

2026-09-28 19:06:36 +01:00

trial.sh

cloud: optional AZ for spot launches

2026-09-28 17:44:26 +01:00

userdata.sh

P8: GSE165845 validation scripts (prepare, §16.5 metrics) and cloud task

2026-09-28 17:43:31 +01:00