kemal 7f3cd96fc4 Release 1.1.0: compiled kernels (P9) and packaging (P10)

2026-09-28 23:56:39 +01:00

..

cli

CLI: a closed stdout pipe exits 141 silently (was E_INTERNAL); example avoids head under pipefail

2026-09-28 23:14:47 +01:00

cn

P1: file parsers, sample sheet, discovery, CLI inspect

2026-09-27 16:56:39 +01:00

compare

P7: differential-testing harness (simurg compare) and nightly run on the Pi

2026-09-28 17:00:37 +01:00

core

CLI: a closed stdout pipe exits 141 silently (was E_INTERNAL); example avoids head under pipefail

2026-09-28 23:14:47 +01:00

formats

P9 (WIP): compiled kernels (rust/simurg-core, PyO3) with bit-identical pure-Python fallback

2026-09-28 21:28:55 +01:00

genotype

P9 (WIP): compiled kernels (rust/simurg-core, PyO3) with bit-identical pure-Python fallback

2026-09-28 21:28:55 +01:00

harmonize

P6 complete: optional VCF fields, SNV+indel merging, auxiliary MNV loci, PLINK 2 .pgen

2026-09-28 14:29:42 +01:00

pgx

P1: file parsers, sample sheet, discovery, CLI inspect

2026-09-27 16:56:39 +01:00

pipeline

P9 complete: compiled kernels validated (byte-identical, 78-80 GSA samples/min/core), scaling report

2026-09-28 22:32:48 +01:00

qc

P5 validated on 2141 1000G samples; control-metric fixes (K-021)

2026-09-28 10:25:32 +01:00

signal

P9 (WIP): compiled kernels (rust/simurg-core, PyO3) with bit-identical pure-Python fallback

2026-09-28 21:28:55 +01:00

synth

P1: file parsers, sample sheet, discovery, CLI inspect

2026-09-27 16:56:39 +01:00

__init__.py

Release 1.1.0: compiled kernels (P9) and packaging (P10)

2026-09-28 23:56:39 +01:00

_core.py

P9 (WIP): compiled kernels (rust/simurg-core, PyO3) with bit-identical pure-Python fallback

2026-09-28 21:28:55 +01:00