kemal dd5d87c43f CLI: a closed stdout pipe exits 141 silently (was E_INTERNAL); example avoids head under pipefail ...

Found by the P10 fresh-VM run: `simurg inspect … | head` raised BrokenPipeError, reported as
an internal error, and stopped examples/gsa_demo.sh (set -o pipefail). run_guarded now flushes
stdout inside the guard and maps BrokenPipeError to ExitCode.SIGPIPE (141) without a message.
p10.sh: SKIP_DOCKER/SKIP_CONDA, clearer digest report; p10t.sh runs build+pip+tutorial only.

2026-09-28 23:14:47 +01:00

..

p1p2.sh

P3: vectorised nearest-neighbour search; task-driven cloud trials

2026-09-27 22:57:03 +01:00

p3.sh

P3: vectorised nearest-neighbour search; task-driven cloud trials

2026-09-27 22:57:03 +01:00

p4.sh

P4: unit tests for calling/BAF/LRR/sex/CLI; vendor validation script

2026-09-28 00:10:47 +01:00

p5.sh

P5: cloud task for cohort QC validation; configurable gp3 throughput; batched contamination map

2026-09-28 09:10:02 +01:00

p8.sh

P8 cloud task: stream NYGC VCFs through bcftools instead of downloading

2026-09-28 19:06:36 +01:00

p9.sh

P9 cloud task: install gcc (linker for the Rust build); guide: kernel installation

2026-09-28 21:35:42 +01:00

p9b.sh

P9: scaling on a RAM disk (bench --work/--clean, cloud task p9b)

2026-09-28 22:04:10 +01:00

p10.sh

CLI: a closed stdout pipe exits 141 silently (was E_INTERNAL); example avoids head under pipefail

2026-09-28 23:14:47 +01:00

p10t.sh

CLI: a closed stdout pipe exits 141 silently (was E_INTERNAL); example avoids head under pipefail

2026-09-28 23:14:47 +01:00