kemalandClaude Opus 5.5 88f41314b8 v2 CN: synthetic implant evaluation (CYTO-022); reference GTC discovery follows symlinks ...

216 implanted events in 22 synthetic GSA samples (4 replicates per kind x fraction x
size; reference model from 30 other samples): constitutional DEL/DUP 16/16 at 5-20 Mb,
mosaic loss/gain/CN-LOH at 15 % / 5 Mb 12/12.

Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv

2026-09-29 01:30:07 +01:00

..

cn_synthetic_eval.py

v2 CN: synthetic implant evaluation (CYTO-022); reference GTC discovery follows symlinks

2026-09-29 01:30:07 +01:00

methyl_oracle_compare.py

methylation: combine_neg option; oracle compares both background variants and logs sesame's negative controls

2026-09-29 00:36:44 +01:00

sesame_oracle.R

methylation: combine_neg option; oracle compares both background variants and logs sesame's negative controls

2026-09-29 00:36:44 +01:00