{ "samples": 360, "min_qual": 20.0, "ignored_filters": [ "SampleQuality" ], "sensitivity": { "DEL": { "100-500kb": { "found": 126, "truth": 1554, "rate": 0.0811 }, "1000-infkb": { "found": 0, "truth": 15, "rate": 0.0 }, "25-50kb": { "found": 16, "truth": 225, "rate": 0.0711 }, "50-100kb": { "found": 70, "truth": 894, "rate": 0.0783 }, "500-1000kb": { "found": 13, "truth": 180, "rate": 0.0722 } }, "DUP": { "100-500kb": { "found": 117, "truth": 1059, "rate": 0.1105 }, "1000-infkb": { "found": 6, "truth": 21, "rate": 0.2857 }, "25-50kb": { "found": 1, "truth": 198, "rate": 0.0051 }, "50-100kb": { "found": 15, "truth": 462, "rate": 0.0325 }, "500-1000kb": { "found": 10, "truth": 78, "rate": 0.1282 } } }, "precision": { "DEL": { "in_truth": 222, "calls": 571, "rate": 0.3888 }, "DUP": { "in_truth": 149, "calls": 436, "rate": 0.3417 } }, "replicate_reproducibility": { "CNV": { "matched": 554, "comparisons": 2014, "rate": 0.2751 }, "LOH": { "matched": 286, "comparisons": 394, "rate": 0.7259 } }, "calls_per_sample_median": 2.0, "loh_calls_per_sample_median": 0.0 }