kemal
b6e8177e5a
v2 CN: truth validation script (NYGC 30x SV freeze V3) and cloud task cnv
2026-09-29 01:39:49 +01:00
kemal
70001a0d6c
v2 CN: synthetic implant evaluation (CYTO-022); reference GTC discovery follows symlinks
...
216 implanted events in 22 synthetic GSA samples (4 replicates per kind x fraction x
size; reference model from 30 other samples): constitutional DEL/DUP 16/16 at 5-20 Mb,
mosaic loss/gain/CN-LOH at 15 % / 5 Mb 12/12.
2026-09-29 01:30:07 +01:00
kemal
6aebb31991
methylation: combine_neg option; oracle compares both background variants and logs sesame's negative controls
2026-09-29 00:36:44 +01:00
kemal
3a816a1c44
sesame oracle: compare without bead-count masking on both sides
2026-09-29 00:29:25 +01:00
kemal
1aa9459525
sesame oracle: cache EPIC annotation up front
2026-09-29 00:23:24 +01:00
kemal
03587b2b0a
sesame oracle: explicit platform, cache fallback
2026-09-29 00:18:17 +01:00
kemal
da4a67b59b
v2 methylation: sesame oracle scripts and cloud task
2026-09-29 00:14:18 +01:00
kemal