SimurgArray

6 Commits

Include renames

Author	SHA1	Message	Date
kemalandClaude Opus 5.5	040c1d463d	docs: user guide sections for CN/LOH/mosaicism and pharmacogenomics ci / test (3.12) (push) Failing after 8s Details ci / test (3.13) (push) Failing after 10s Details Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-29 17:15:43 +01:00
kemalandClaude Opus 5.5	12503fbc33	sesame oracle: explicit platform, cache fallback ci / test (3.12) (push) Failing after 8s Details ci / test (3.13) (push) Failing after 10s Details Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-29 00:18:17 +01:00
kemalandClaude Opus 5.5	7c0e348033	Release 1.1.0: compiled kernels (P9) and packaging (P10) ci / test (3.13) (push) Failing after 9s Details ci / test (3.12) (push) Failing after 8s Details Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-28 23:56:39 +01:00
kemalandClaude Opus 5.5	704eb06987	P10 complete: packaging verified on fresh x86_64 and aarch64 VMs ci / test (3.12) (push) Failing after 8s Details ci / test (3.13) (push) Failing after 9s Details Wheels (pure + manylinux_2_28 kernels), sdist, Docker image and conda packages built and installed on fresh Ubuntu 24.04 machines; 225 unit tests pass against the installed package; the tutorial runs with pip (with and without kernels); GTC/VCF content digests are identical across pip, Docker and conda on both architectures and equal to the Pi's run. docs/validation/P10.md; guide: install from wheels, Docker, conda; exit code 141. Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-28 23:53:59 +01:00
kemalandClaude Opus 5.5	c97aac1a5a	P9 cloud task: install gcc (linker for the Rust build); guide: kernel installation ci / test (3.12) (push) Failing after 8s Details ci / test (3.13) (push) Failing after 10s Details Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-28 21:35:42 +01:00
kemalandClaude Opus 5.5	874aeaef61	v1.0.0: user guide, examples, changelog ci / test (3.13) (push) Failing after 9s Details ci / test (3.12) (push) Failing after 10s Details docs/user_guide.md (install, inputs, complete run, commands, presets, QC, outputs, accuracy, limitations, troubleshooting), examples/gsa_demo.sh (end-to-end run on the public GSA demo, verified on the Pi), examples/sample_sheet.csv, CHANGELOG.md; version 1.0.0. Co-Authored-By: Claude Opus 5.5 <[email protected]> Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv	2026-09-28 20:38:24 +01:00