kemal/SimurgArray
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6 Commits
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kemalandClaude Opus 5.5 88f41314b8 v2 CN: synthetic implant evaluation (CYTO-022); reference GTC discovery follows symlinks
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216 implanted events in 22 synthetic GSA samples (4 replicates per kind x fraction x
size; reference model from 30 other samples): constitutional DEL/DUP 16/16 at 5-20 Mb,
mosaic loss/gain/CN-LOH at 15 % / 5 Mb 12/12.

Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 01:30:07 +01:00
kemalandClaude Opus 5.5 86050ef2fc methylation: combine_neg option; oracle compares both background variants and logs sesame's negative controls
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Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 00:36:44 +01:00
kemalandClaude Opus 5.5 916e2589fa sesame oracle: compare without bead-count masking on both sides
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Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 00:29:25 +01:00
kemalandClaude Opus 5.5 beaf24cfd1 sesame oracle: cache EPIC annotation up front
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Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 00:23:24 +01:00
kemalandClaude Opus 5.5 12503fbc33 sesame oracle: explicit platform, cache fallback
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Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 00:18:17 +01:00
kemalandClaude Opus 5.5 2c503d2742 v2 methylation: sesame oracle scripts and cloud task
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Co-Authored-By: Claude Opus 5.5 <[email protected]>
Claude-Session: https://claude.ai/code/session_01814GKVzZVL3FuF3DeiZXhv
 2026-09-29 00:14:18 +01:00